Wednesday, October 10, 2018

More IBD-statistics, including Mordvas, Brits and Basques

I have now automated the process and can do "quick and dirty" statistics of all below listed populations.  Adding new populations takes about two days in a case I have them in my backbone data base.   Here are now existing populations and sample counts.   Adding new populations to my data base takes longer, around a week. 

The results are based on slightly changed phasing parameters, so there can be slight differences in absolute values.  Used programs are Plink, Impute2 and Beagle version 5.